Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | EJP69_26060 | Not Available | Positive | 5563227 - 5564069 | 31997.0 |
| dihydrofolate reductase | EJP69_26065 | Not Available | Positive | 5564084 - 5564605 | 19008.4 |
| duf2183 domain-containing protein | EJP69_26070 | Not Available | Positive | 5564610 - 5565752 | 42669.9 |
| hypothetical protein | EJP69_26075 | Not Available | Positive | 5565948 - 5566187 | 8744.72 |
| type vi secretion system contractile sheath small subunit | EJP69_26080 | Not Available | Positive | 5566670 - 5567251 | 21028.9 |
| type vi secretion system contractile sheath large subunit | EJP69_26085 | Not Available | Positive | 5567310 - 5568809 | 54502.6 |
| type vi secretion system tube protein hcp | EJP69_26090 | Not Available | Positive | 5568860 - 5569342 | 16897.1 |
| type vi secretion system baseplate subunit tsse | EJP69_26095 | Not Available | Positive | 5569375 - 5569839 | 16562.7 |
| type vi secretion system baseplate subunit tssf | EJP69_26100 | Not Available | Positive | 5569850 - 5571631 | 66026.8 |
| type vi secretion system baseplate subunit tssg | EJP69_26105 | Not Available | Positive | 5571595 - 5572635 | 37483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
