Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase type ii | EJP69_25810 | Not Available | Negative | 5507733 - 5508464 | 26420.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EJP69_25815 | Not Available | Negative | 5508476 - 5509111 | 21829.5 |
| phosphogluconate dehydratase | EJP69_25820 | Not Available | Negative | 5509157 - 5510998 | 64565.5 |
| ompa family protein | EJP69_25825 | Not Available | Negative | 5511211 - 5511768 | 18916.9 |
| calcium transporter chac | EJP69_25830 | Not Available | Positive | 5511904 - 5512602 | 25986.8 |
| superoxide dismutase family protein | EJP69_25835 | Not Available | Positive | 5512599 - 5513138 | 17872.1 |
| nucleotidyltransferase family protein | EJP69_25840 | Not Available | Negative | 5513173 - 5513742 | 18910.7 |
| pyridoxamine 5'-phosphate oxidase | EJP69_25845 | Not Available | Positive | 5513772 - 5514425 | 24835.3 |
| ompa family protein | EJP69_25850 | Not Available | Negative | 5514438 - 5515649 | 43781.4 |
| hypothetical protein | EJP69_25855 | Not Available | Positive | 5515707 - 5516066 | 11442.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
