Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | EJP69_25655 | Not Available | Positive | 5477133 - 5478530 | 51233.9 |
| aminodeoxychorismate synthase component i | EJP69_25660 | Not Available | Positive | 5478520 - 5480313 | 65740.0 |
| merr family transcriptional regulator | EJP69_25665 | Not Available | Positive | 5480371 - 5480859 | 18152.7 |
| carboxymuconolactone decarboxylase family protein | EJP69_25670 | Not Available | Positive | 5480786 - 5481241 | 16236.5 |
| energy-dependent translational throttle protein etta | EJP69_25675 | Not Available | Negative | 5481348 - 5483009 | 61460.3 |
| dead/deah box helicase | EJP69_25680 | Not Available | Positive | 5483312 - 5485084 | 62089.8 |
| endonuclease | EJP69_25685 | Not Available | Positive | 5485226 - 5486266 | 38562.7 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EJP69_25690 | Not Available | Negative | 5486411 - 5487481 | 38951.1 |
| carbohydrate abc transporter permease | EJP69_25700 | Not Available | Negative | 5487616 - 5488467 | 31591.2 |
| sugar abc transporter permease | EJP69_25705 | Not Available | Negative | 5488464 - 5489348 | 32722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
