Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EJP69_25140 | Not Available | Positive | 5386746 - 5387807 | 38347.8 |
| response regulator transcription factor | EJP69_25145 | Not Available | Positive | 5387837 - 5388673 | 30222.6 |
| hypothetical protein | EJP69_25150 | Not Available | Negative | 5388755 - 5389102 | 12413.6 |
| glutamine--trna ligase/yqey domain fusion protein | EJP69_25155 | Not Available | Positive | 5389253 - 5391070 | 67688.8 |
| hypothetical protein | EJP69_25160 | Not Available | Negative | 5391095 - 5391403 | 10399.6 |
| pseudouridine synthase | EJP69_25165 | Not Available | Positive | 5391493 - 5392062 | 21241.5 |
| m23 family metallopeptidase | EJP69_25170 | Not Available | Positive | 5392118 - 5393035 | 32369.2 |
| hypothetical protein | EJP69_25175 | Not Available | Positive | 5393058 - 5393381 | 11950.0 |
| succinylglutamate desuccinylase | EJP69_25180 | Not Available | Negative | 5393392 - 5394327 | 33971.7 |
| mbl fold metallo-hydrolase | EJP69_25185 | Not Available | Negative | 5394442 - 5395419 | 34713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
