Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tannase/feruloyl esterase family alpha/beta hydrolase | EJP69_23965 | Not Available | Positive | 5140551 - 5142254 | 59610.8 |
| dsba family protein | EJP69_23970 | Not Available | Negative | 5142273 - 5143001 | 25878.6 |
| mbl fold metallo-hydrolase | EJP69_23975 | Not Available | Negative | 5142989 - 5143888 | 32133.9 |
| lysr family transcriptional regulator | EJP69_23980 | Not Available | Negative | 5144042 - 5144944 | 32798.7 |
| hydroxymethylglutaryl-coa lyase | EJP69_23985 | Not Available | Positive | 5145048 - 5145995 | 33326.3 |
| coa transferase | EJP69_23990 | Not Available | Positive | 5145992 - 5147200 | 43361.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_23995 | Not Available | Positive | 5147270 - 5148235 | 32999.3 |
| quaternary ammonium compound efflux smr transporter suge | EJP69_24000 | Not Available | Negative | 5148243 - 5148563 | 11052.0 |
| hpp family protein | EJP69_24005 | Not Available | Negative | 5148597 - 5149730 | 40951.1 |
| bcr/cfla family efflux mfs transporter | EJP69_24010 | Not Available | Negative | 5149744 - 5150979 | 44615.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
