Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | EJP69_23815 | Not Available | Negative | 5106623 - 5107513 | 31679.4 |
| nad(p)-dependent oxidoreductase | EJP69_23820 | Not Available | Negative | 5107518 - 5108330 | 29748.1 |
| fadr family transcriptional regulator | EJP69_23825 | Not Available | Positive | 5108556 - 5109419 | 30853.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_23830 | Not Available | Positive | 5109548 - 5110555 | 35372.9 |
| 5-dehydro-4-deoxyglucarate dehydratase | EJP69_23835 | Not Available | Positive | 5110610 - 5111521 | 32398.1 |
| nuclear transport factor 2 family protein | EJP69_23840 | Not Available | Positive | 5111569 - 5112018 | 15438.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_23845 | Not Available | Positive | 5112024 - 5113010 | 34823.9 |
| glucarate dehydratase | EJP69_23850 | Not Available | Positive | 5113027 - 5114388 | 49638.4 |
| aldehyde dehydrogenase family protein | EJP69_23855 | Not Available | Positive | 5114479 - 5115915 | 50529.4 |
| abc transporter permease subunit | EJP69_23860 | Not Available | Negative | 5115923 - 5117476 | 54792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
