Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tannase/feruloyl esterase family alpha/beta hydrolase | EJP69_02300 | Not Available | Positive | 497019 - 498548 | 54805.1 |
| duf4150 domain-containing protein | EJP69_02305 | Not Available | Negative | 498582 - 498968 | 13493.7 |
| duf3540 domain-containing protein | EJP69_02310 | Not Available | Negative | 498987 - 499733 | 26700.6 |
| pentapeptide repeat-containing protein | EJP69_02315 | Not Available | Negative | 499730 - 500842 | 40883.8 |
| duf2169 domain-containing protein | EJP69_02320 | Not Available | Negative | 500839 - 503493 | 98007.0 |
| hypothetical protein | EJP69_02325 | Not Available | Negative | 503501 - 503935 | 15730.2 |
| type vi secretion system tip protein vgrg | EJP69_02330 | Not Available | Negative | 503948 - 506290 | 86311.8 |
| iron-containing alcohol dehydrogenase | EJP69_02335 | Not Available | Negative | 506475 - 507611 | 39996.3 |
| alpha/beta hydrolase | EJP69_02340 | Not Available | Positive | 507684 - 508667 | 34937.9 |
| swim zinc finger family protein | EJP69_02345 | Not Available | Positive | 508664 - 510034 | 49279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
