Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding transcriptional accessory protein | EJP69_02250 | Not Available | Positive | 483480 - 485855 | 86433.0 |
| phospholipase | EJP69_02255 | Not Available | Positive | 485908 - 486981 | 39997.7 |
| hypothetical protein | EJP69_02260 | Not Available | Negative | 486945 - 487289 | 11476.6 |
| rida family protein | EJP69_02265 | Not Available | Negative | 487310 - 487681 | 13478.3 |
| efflux transporter outer membrane subunit | EJP69_02270 | Not Available | Negative | 487678 - 489174 | 52179.5 |
| efflux rnd transporter permease subunit | EJP69_02275 | Not Available | Negative | 489200 - 492295 | 111782.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_02280 | Not Available | Negative | 492288 - 493442 | 39864.9 |
| response regulator transcription factor | EJP69_02285 | Not Available | Positive | 493651 - 494364 | 26056.7 |
| hamp domain-containing protein | EJP69_02290 | Not Available | Positive | 494357 - 495766 | 50067.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_02295 | Not Available | Positive | 495886 - 496866 | 34445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
