Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EJP69_23215 | Not Available | Negative | 4978121 - 4979149 | 37553.8 |
| abc transporter atp-binding protein | EJP69_23220 | Not Available | Negative | 4979224 - 4980330 | 40407.8 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EJP69_23225 | Not Available | Negative | 4980358 - 4981650 | 45372.6 |
| plp-dependent aminotransferase family protein | EJP69_23230 | Not Available | Positive | 4981821 - 4983230 | 52023.9 |
| ornithine cyclodeaminase | EJP69_23235 | Not Available | Positive | 4983378 - 4984427 | 38044.8 |
| histone deacetylase family protein | EJP69_23240 | Not Available | Positive | 4984468 - 4985508 | 37617.3 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_23245 | Not Available | Positive | 4985640 - 4986626 | 34916.4 |
| tetr/acrr family transcriptional regulator | EJP69_23250 | Not Available | Negative | 4986613 - 4987191 | 20876.9 |
| mfs transporter | EJP69_23255 | Not Available | Positive | 4987281 - 4988546 | 43062.0 |
| porin | EJP69_23260 | Not Available | Positive | 4988750 - 4989967 | 42640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
