Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | EJP69_21925 | Not Available | Negative | 4705968 - 4706495 | 19785.6 |
| virulence protein scie type | EJP69_21930 | Not Available | Negative | 4706569 - 4707432 | 31460.9 |
| type vi secretion system tube protein hcp | EJP69_21935 | Not Available | Negative | 4707556 - 4708038 | 17211.2 |
| type vi secretion system contractile sheath large subunit | EJP69_21940 | Not Available | Negative | 4708088 - 4709596 | 56492.5 |
| type vi secretion system contractile sheath small subunit | EJP69_21945 | Not Available | Negative | 4709627 - 4710196 | 20636.6 |
| type vi secretion system protein tssa | EJP69_21950 | Not Available | Negative | 4710267 - 4711373 | 40079.9 |
| fumarylacetoacetate hydrolase | EJP69_21955 | Not Available | Negative | 4711525 - 4712706 | 41299.5 |
| c-type cytochrome | EJP69_21960 | Not Available | Negative | 4712797 - 4716543 | 133258.0 |
| (2fe-2s)-binding protein | EJP69_21965 | Not Available | Negative | 4716540 - 4717040 | 17329.0 |
| abc transporter substrate-binding protein | EJP69_21970 | Not Available | Negative | 4717018 - 4718160 | 40615.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
