Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tet(a)/tet(b)/tet(c) family tetracycline efflux mfs transporter | EJP69_21265 | Not Available | Negative | 4561253 - 4562464 | 42342.9 |
| tetr family transcriptional regulator | EJP69_21270 | Not Available | Positive | 4562554 - 4563237 | 25045.1 |
| choline dehydrogenase | EJP69_21275 | Not Available | Negative | 4563185 - 4564810 | 59341.4 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EJP69_21280 | Not Available | Negative | 4564889 - 4566397 | 53827.9 |
| lysr family transcriptional regulator | EJP69_21285 | Not Available | Positive | 4566518 - 4567447 | 33860.7 |
| abc transporter permease | EJP69_21290 | Not Available | Positive | 4567581 - 4568747 | 41999.3 |
| atp-binding cassette domain-containing protein | EJP69_21295 | Not Available | Positive | 4568760 - 4569602 | 30046.5 |
| mce family protein | EJP69_21300 | Not Available | Positive | 4569619 - 4570578 | 33585.9 |
| hypothetical protein | EJP69_21305 | Not Available | Positive | 4570605 - 4571282 | 23999.6 |
| hypothetical protein | EJP69_21310 | Not Available | Positive | 4571320 - 4571541 | 7545.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
