Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | EJP69_02000 | Not Available | Positive | 430201 - 430608 | 14497.5 |
| carboxymuconolactone decarboxylase family protein | EJP69_02005 | Not Available | Negative | 430628 - 431080 | 16680.9 |
| plp-dependent aminotransferase family protein | EJP69_02010 | Not Available | Positive | 431184 - 432617 | 52316.1 |
| diguanylate cyclase | EJP69_02015 | Not Available | Positive | 432757 - 435555 | 101832.0 |
| gnat family n-acetyltransferase | EJP69_02020 | Not Available | Negative | 435577 - 436041 | 16758.8 |
| mfs transporter | EJP69_02025 | Not Available | Negative | 436147 - 437337 | 40434.7 |
| lysr family transcriptional regulator | EJP69_02030 | Not Available | Positive | 437432 - 438394 | 34827.2 |
| 2-keto-4-pentenoate hydratase | EJP69_02035 | Not Available | Negative | 438343 - 439113 | 27138.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_02040 | Not Available | Negative | 439267 - 440244 | 34208.3 |
| aminotransferase class v-fold plp-dependent enzyme | EJP69_02045 | Not Available | Negative | 440331 - 441572 | 44470.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
