Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJP69_19890 | Not Available | Positive | 4273701 - 4274633 | 34324.8 |
| duf421 domain-containing protein | EJP69_19895 | Not Available | Positive | 4275015 - 4275557 | 20650.9 |
| duf421 domain-containing protein | EJP69_19900 | Not Available | Positive | 4275557 - 4276060 | 18475.5 |
| tannase/feruloyl esterase family alpha/beta hydrolase | EJP69_19905 | Not Available | Negative | 4276211 - 4277866 | 57434.6 |
| crp/fnr family transcriptional regulator | EJP69_19910 | Not Available | Positive | 4277902 - 4278597 | 25590.7 |
| hypothetical protein | EJP69_19915 | Not Available | Negative | 4278644 - 4278874 | 8299.73 |
| efflux transporter outer membrane subunit | EJP69_19920 | Not Available | Negative | 4278928 - 4280385 | 50643.2 |
| tetr/acrr family transcriptional regulator | EJP69_19925 | Not Available | Positive | 4280492 - 4281109 | 23176.8 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_19930 | Not Available | Positive | 4281192 - 4282316 | 38866.4 |
| efflux rnd transporter permease subunit | EJP69_19935 | Not Available | Positive | 4282325 - 4285402 | 111326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
