Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EJP69_19575 | Not Available | Negative | 4209539 - 4210573 | 37863.0 |
| ykgj family cysteine cluster protein | EJP69_19580 | Not Available | Positive | 4210726 - 4211358 | 22852.6 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | EJP69_19585 | Not Available | Positive | 4211895 - 4212203 | 11137.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EJP69_19590 | Not Available | Positive | 4212200 - 4212412 | 8060.79 |
| xre family transcriptional regulator | EJP69_19600 | Not Available | Positive | 4213135 - 4213572 | 15762.0 |
| hamp domain-containing protein | EJP69_19605 | Not Available | Negative | 4213858 - 4215054 | 43750.9 |
| response regulator transcription factor | EJP69_19610 | Not Available | Negative | 4215057 - 4215746 | 25647.1 |
| cyclic peptide export abc transporter | EJP69_19615 | Not Available | Positive | 4216080 - 4217780 | 61917.3 |
| abc transporter substrate-binding protein | EJP69_19620 | Not Available | Positive | 4217894 - 4219033 | 40316.2 |
| hypothetical protein | EJP69_19625 | Not Available | Negative | 4219195 - 4220025 | 30006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
