Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJP69_19520 | Not Available | Negative | 4193819 - 4194289 | 17952.2 |
| prephenate dehydratase | EJP69_19530 | Not Available | Positive | 4195016 - 4195885 | 31053.4 |
| type iv pilus secretin family protein | EJP69_19535 | Not Available | Negative | 4195945 - 4197981 | 72251.4 |
| abc transporter atp-binding protein | EJP69_19540 | Not Available | Negative | 4198911 - 4199309 | 15292.1 |
| glycosyltransferase family 39 protein | EJP69_19545 | Not Available | Positive | 4200379 - 4201872 | 55075.0 |
| glycosyltransferase | EJP69_19550 | Not Available | Positive | 4201859 - 4202944 | 39534.1 |
| chbg/hpnk family deacetylase | EJP69_19555 | Not Available | Positive | 4203120 - 4204046 | 34120.1 |
| tolc family protein | EJP69_19560 | Not Available | Negative | 4204550 - 4205962 | 51091.6 |
| macb family efflux pump subunit | EJP69_19565 | Not Available | Negative | 4205986 - 4207941 | 68331.1 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_19570 | Not Available | Negative | 4207944 - 4209149 | 42409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
