Variovorax gossypii str. DSM 100435

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax gossypii str. DSM 100435 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is notable for being non-spore-forming and possesses a single replicon, which is relevant for its genomic stability and replication processes. As a member of the genus Variovorax, this species is likely to play a role in various ecological contexts, particularly in the degradation of organic compounds. The aerobic nature of V. gossypii suggests that it thrives in oxygen-rich environments, which may influence its habitat and interactions with other microorganisms. The accession number RXOE00000000.1 is associated with its genomic data, providing a resource for further research into its genetic makeup and potential applications in bioremediation or organic matter breakdown. Understanding the metabolic pathways and ecological roles of such bacteria may enhance our knowledge of nutrient cycling and soil health, indicating the importance of Variovorax gossypii in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax gossypii
StrainDSM 100435

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax gossypii strain DSM 100435 45, whole genome shotgun

Gene Summary

Adenine Count

1023038 bp

Thymine Count

1028372 bp

Guanine Count

2128089 bp

Cytosine Count

2121555 bp

Genome Length

6302100 bp

Protein-coding Genes

5721 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseEJP69_18690Not AvailableNegative4028269 - 402921933426.6
fad-dependent oxidoreductaseEJP69_18695Not AvailableNegative4029907 - 403135252306.0
alpha/beta fold hydrolaseEJP69_18700Not AvailableNegative4031363 - 403218428615.5
tripartite tricarboxylate transporter substrate binding proteinEJP69_18705Not AvailableNegative4032195 - 403319034356.7
lysr family transcriptional regulatorEJP69_18710Not AvailablePositive4033327 - 403421732428.6
stas domain-containing proteinEJP69_18715Not AvailablePositive4034254 - 403593359323.0
outer membrane protein assembly factor bameEJP69_18720Not AvailableNegative4035942 - 403641817527.9
duf3460 family proteinEJP69_18725Not AvailablePositive4036489 - 40366958186.77
segregation/condensation protein aEJP69_18730Not AvailablePositive4036775 - 403761131962.1
l-aspartate oxidaseEJP69_18735Not AvailablePositive4037633 - 403921957374.3

Displaying genes 3691 – 3700 of 5768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.