Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | EJP69_17175 | Not Available | Positive | 3714756 - 3716549 | 63743.1 |
| type i secretion system permease/atpase | EJP69_17180 | Not Available | Positive | 3716546 - 3718270 | 61517.2 |
| hlyd family type i secretion periplasmic adaptor subunit | EJP69_17185 | Not Available | Positive | 3718315 - 3719682 | 49918.1 |
| channel protein tolc | EJP69_17190 | Not Available | Positive | 3719686 - 3721014 | 49450.5 |
| hypothetical protein | EJP69_17195 | Not Available | Negative | 3721049 - 3726688 | 202177.0 |
| response regulator | EJP69_17200 | Not Available | Negative | 3726718 - 3728493 | 62747.2 |
| response regulator transcription factor | EJP69_17205 | Not Available | Negative | 3728495 - 3729178 | 25399.1 |
| phospholipase d family protein | EJP69_17210 | Not Available | Positive | 3729381 - 3731090 | 61464.8 |
| cupin domain-containing protein | EJP69_17215 | Not Available | Positive | 3731313 - 3731693 | 13981.5 |
| yihy family inner membrane protein | EJP69_17220 | Not Available | Positive | 3731861 - 3732685 | 30311.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
