Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase family protein | EJP69_16965 | Not Available | Positive | 3657789 - 3661337 | 128948.0 |
| pas domain s-box protein | EJP69_16970 | Not Available | Positive | 3661426 - 3663606 | 80623.5 |
| response regulator transcription factor | EJP69_16975 | Not Available | Positive | 3663603 - 3664235 | 22883.5 |
| sdr family nad(p)-dependent oxidoreductase | EJP69_16980 | Not Available | Negative | 3664256 - 3665011 | 27347.8 |
| mfs transporter | EJP69_16985 | Not Available | Positive | 3665496 - 3666845 | 48126.3 |
| dna/rna endonuclease | EJP69_16995 | Not Available | Negative | 3667368 - 3669548 | 80056.6 |
| tripartite tricarboxylate transporter permease | EJP69_17000 | Not Available | Negative | 3669929 - 3671449 | 53815.1 |
| tripartite tricarboxylate transporter tctb family protein | EJP69_17005 | Not Available | Negative | 3671460 - 3671846 | 13482.3 |
| type vi secretion system tube protein hcp | EJP69_17010 | Not Available | Positive | 3672223 - 3672705 | 17241.2 |
| type vi secretion system tip protein vgrg | EJP69_17015 | Not Available | Positive | 3672731 - 3675904 | 114289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
