Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase/pep mutase family protein | EJP69_16660 | Not Available | Positive | 3600799 - 3601659 | 31058.4 |
| hypothetical protein | EJP69_16665 | Not Available | Negative | 3601711 - 3602106 | 14341.1 |
| gnat family n-acetyltransferase | EJP69_16670 | Not Available | Positive | 3602365 - 3603207 | 30382.1 |
| nad(+)--rifampin adp-ribosyltransferase | EJP69_16675 | Not Available | Positive | 3603302 - 3603697 | 14723.5 |
| deaminase | EJP69_16680 | Not Available | Positive | 3603792 - 3604352 | 20607.6 |
| 4-hydroxy-2-oxoheptanedioate aldolase | EJP69_16685 | Not Available | Negative | 3604418 - 3605227 | 27806.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | EJP69_16690 | Not Available | Negative | 3605264 - 3606745 | 52802.0 |
| altronate dehydratase | EJP69_16695 | Not Available | Negative | 3606783 - 3608306 | 54085.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_16700 | Not Available | Negative | 3608350 - 3609345 | 35529.8 |
| lysr family transcriptional regulator | EJP69_16705 | Not Available | Positive | 3609485 - 3610414 | 34111.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
