Variovorax gossypii str. DSM 100435

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax gossypii str. DSM 100435 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is notable for being non-spore-forming and possesses a single replicon, which is relevant for its genomic stability and replication processes. As a member of the genus Variovorax, this species is likely to play a role in various ecological contexts, particularly in the degradation of organic compounds. The aerobic nature of V. gossypii suggests that it thrives in oxygen-rich environments, which may influence its habitat and interactions with other microorganisms. The accession number RXOE00000000.1 is associated with its genomic data, providing a resource for further research into its genetic makeup and potential applications in bioremediation or organic matter breakdown. Understanding the metabolic pathways and ecological roles of such bacteria may enhance our knowledge of nutrient cycling and soil health, indicating the importance of Variovorax gossypii in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax gossypii
StrainDSM 100435

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax gossypii strain DSM 100435 45, whole genome shotgun

Gene Summary

Adenine Count

1023038 bp

Thymine Count

1028372 bp

Guanine Count

2128089 bp

Cytosine Count

2121555 bp

Genome Length

6302100 bp

Protein-coding Genes

5721 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isocitrate lyase/pep mutase family proteinEJP69_16660Not AvailablePositive3600799 - 360165931058.4
hypothetical proteinEJP69_16665Not AvailableNegative3601711 - 360210614341.1
gnat family n-acetyltransferaseEJP69_16670Not AvailablePositive3602365 - 360320730382.1
nad(+)--rifampin adp-ribosyltransferaseEJP69_16675Not AvailablePositive3603302 - 360369714723.5
deaminaseEJP69_16680Not AvailablePositive3603792 - 360435220607.6
4-hydroxy-2-oxoheptanedioate aldolaseEJP69_16685Not AvailableNegative3604418 - 360522727806.4
nad-dependent succinate-semialdehyde dehydrogenaseEJP69_16690Not AvailableNegative3605264 - 360674552802.0
altronate dehydrataseEJP69_16695Not AvailableNegative3606783 - 360830654085.6
tripartite tricarboxylate transporter substrate binding proteinEJP69_16700Not AvailableNegative3608350 - 360934535529.8
lysr family transcriptional regulatorEJP69_16705Not AvailablePositive3609485 - 361041434111.2

Displaying genes 3291 – 3300 of 5768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.