Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase | EJP69_16610 | Not Available | Positive | 3587141 - 3588874 | 64170.3 |
| dienelactone hydrolase family protein | EJP69_16615 | Not Available | Positive | 3588918 - 3590153 | 45183.1 |
| lysr family transcriptional regulator | EJP69_16620 | Not Available | Negative | 3590178 - 3591095 | 33262.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_16625 | Not Available | Positive | 3591254 - 3592246 | 34270.7 |
| amidase | EJP69_16630 | Not Available | Positive | 3592246 - 3593796 | 55311.3 |
| xre family transcriptional regulator | EJP69_16635 | Not Available | Negative | 3593806 - 3595227 | 52472.9 |
| acyl-coa thioesterase | EJP69_16640 | Not Available | Positive | 3595340 - 3595741 | 14498.5 |
| 2-methylcitrate synthase | EJP69_16645 | Not Available | Positive | 3595738 - 3596901 | 42518.9 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | EJP69_16650 | Not Available | Positive | 3596958 - 3599564 | 94883.4 |
| 2-methylaconitate cis-trans isomerase prpf | EJP69_16655 | Not Available | Positive | 3599583 - 3600779 | 41325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
