Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacylase | EJP69_16260 | Not Available | Negative | 3514629 - 3516233 | 56800.7 |
| tetratricopeptide repeat protein | EJP69_16265 | Not Available | Negative | 3516361 - 3517737 | 49445.0 |
| 4-oxalocrotonate tautomerase | EJP69_16270 | Not Available | Negative | 3517802 - 3518200 | 14435.3 |
| lysr family transcriptional regulator | EJP69_16275 | Not Available | Positive | 3518316 - 3519176 | 30742.4 |
| yitt family protein | EJP69_16280 | Not Available | Positive | 3519218 - 3519844 | 22566.0 |
| mfs transporter | EJP69_16285 | Not Available | Positive | 3519899 - 3521284 | 48507.9 |
| amidase | EJP69_16290 | Not Available | Negative | 3521294 - 3522706 | 50085.1 |
| abc transporter substrate-binding protein | EJP69_16295 | Not Available | Negative | 3522874 - 3524361 | 53595.3 |
| abc transporter substrate-binding protein | EJP69_16300 | Not Available | Negative | 3524600 - 3526093 | 54589.5 |
| atp-binding cassette domain-containing protein | EJP69_16305 | Not Available | Negative | 3526208 - 3527038 | 30098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
