Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | EJP69_15660 | Not Available | Negative | 3404292 - 3405254 | 34861.2 |
| secretion system protein | EJP69_15665 | Not Available | Negative | 3405251 - 3406270 | 36542.3 |
| cpaf family protein | EJP69_15670 | Not Available | Negative | 3406248 - 3407570 | 49059.8 |
| histidine kinase | EJP69_15675 | Not Available | Negative | 3407575 - 3408858 | 45667.7 |
| type ii and iii secretion system protein family protein | EJP69_15680 | Not Available | Negative | 3408903 - 3410321 | 49812.6 |
| flp pilus assembly protein cpab | EJP69_15685 | Not Available | Negative | 3410371 - 3411366 | 34511.8 |
| prepilin peptidase | EJP69_15690 | Not Available | Negative | 3411448 - 3411972 | 18491.2 |
| flp family type ivb pilin | EJP69_15695 | Not Available | Negative | 3411988 - 3412173 | 6328.82 |
| flp family type ivb pilin | EJP69_15700 | Not Available | Negative | 3412259 - 3412447 | 6347.72 |
| hypothetical protein | EJP69_15705 | Not Available | Negative | 3412871 - 3414430 | 55998.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
