Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | EJP69_14750 | Not Available | Negative | 3185315 - 3186706 | 51239.5 |
| response regulator transcription factor | EJP69_14755 | Not Available | Negative | 3186675 - 3187361 | 24808.4 |
| mipa/ompv family protein | EJP69_14760 | Not Available | Negative | 3187361 - 3188185 | 30403.4 |
| efflux transporter outer membrane subunit | EJP69_14765 | Not Available | Positive | 3188356 - 3189828 | 52330.8 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_14770 | Not Available | Positive | 3189840 - 3190955 | 38890.3 |
| efflux rnd transporter permease subunit | EJP69_14775 | Not Available | Positive | 3190952 - 3194056 | 110296.0 |
| chorismate mutase | EJP69_14780 | Not Available | Positive | 3194364 - 3194756 | 14505.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_14785 | Not Available | Positive | 3194783 - 3195739 | 34125.2 |
| hypothetical protein | EJP69_14790 | Not Available | Positive | 3196091 - 3196756 | 24343.0 |
| transposase domain-containing protein | EJP69_14795 | Not Available | Negative | 3196742 - 3196915 | 6263.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
