Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | EJP69_01350 | Not Available | Positive | 292547 - 293269 | 25822.6 |
| rna methyltransferase | EJP69_01355 | Not Available | Positive | 293281 - 294066 | 27432.2 |
| carbamoyl-phosphate synthase small subunit | EJP69_01360 | Not Available | Positive | 294209 - 295402 | 42486.1 |
| carbamoyl-phosphate synthase large subunit | EJP69_01365 | Not Available | Positive | 295395 - 298643 | 117914.0 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | EJP69_01370 | Not Available | Positive | 298655 - 299524 | 32519.8 |
| transcription elongation factor grea | EJP69_01375 | Not Available | Positive | 299589 - 300065 | 17055.1 |
| duf4149 domain-containing protein | EJP69_01380 | Not Available | Positive | 300086 - 300502 | 15174.1 |
| glycosyltransferase | EJP69_01385 | Not Available | Negative | 300566 - 301285 | 27681.0 |
| yhby family rna-binding protein | EJP69_01390 | Not Available | Negative | 301330 - 301809 | 17746.9 |
| rlme family rna methyltransferase | EJP69_01395 | Not Available | Positive | 301843 - 302511 | 24052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
