Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter subunit c | EJP69_14020 | Not Available | Negative | 3037744 - 3038094 | 12411.6 |
| monovalent cation/h+ antiporter subunit a | EJP69_14025 | Not Available | Negative | 3038094 - 3041039 | 106141.0 |
| fluoride efflux transporter crcb | EJP69_14030 | Not Available | Negative | 3041128 - 3041505 | 12999.5 |
| trap transporter large permease subunit | EJP69_14035 | Not Available | Negative | 3041546 - 3042841 | 46388.5 |
| trap transporter small permease | EJP69_14040 | Not Available | Negative | 3042899 - 3043432 | 19598.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | EJP69_14045 | Not Available | Negative | 3043522 - 3044490 | 34736.6 |
| helix-hairpin-helix domain-containing protein | EJP69_14050 | Not Available | Negative | 3044646 - 3044975 | 11488.0 |
| lipopolysaccharide assembly protein lapb | EJP69_14055 | Not Available | Negative | 3045115 - 3046284 | 43666.5 |
| lapa family protein | EJP69_14060 | Not Available | Negative | 3046274 - 3046612 | 11808.4 |
| integration host factor subunit beta | EJP69_14065 | Not Available | Negative | 3046754 - 3047077 | 12007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
