Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | EJP69_12960 | Not Available | Negative | 2785090 - 2785455 | 13848.5 |
| succinate dehydrogenase, cytochrome b556 subunit | EJP69_12965 | Not Available | Negative | 2785469 - 2785915 | 16639.6 |
| gntr family transcriptional regulator | EJP69_12970 | Not Available | Negative | 2786151 - 2786909 | 28239.0 |
| malate dehydrogenase | EJP69_12975 | Not Available | Positive | 2787094 - 2788080 | 35012.3 |
| trans-aconitate 2-methyltransferase | EJP69_12980 | Not Available | Positive | 2788099 - 2788884 | 29509.3 |
| coa ester lyase | EJP69_12985 | Not Available | Positive | 2788881 - 2789879 | 34858.7 |
| hypothetical protein | EJP69_12990 | Not Available | Positive | 2789918 - 2790478 | 19796.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EJP69_12995 | Not Available | Positive | 2790568 - 2793159 | 93054.7 |
| hypothetical protein | EJP69_13000 | Not Available | Negative | 2793244 - 2794104 | 31986.0 |
| duf2827 domain-containing protein | EJP69_13005 | Not Available | Negative | 2794121 - 2795257 | 42746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
