Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiix family permuted papain-like enzyme | EJP69_12150 | Not Available | Negative | 2617587 - 2618204 | 22820.7 |
| trap transporter large permease subunit | EJP69_12155 | Not Available | Negative | 2618238 - 2619722 | 51800.3 |
| trap transporter small permease subunit | EJP69_12160 | Not Available | Negative | 2619723 - 2620295 | 20468.9 |
| hypothetical protein | EJP69_12165 | Not Available | Positive | 2620390 - 2620953 | 21157.9 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_12170 | Not Available | Negative | 2620967 - 2621959 | 34932.4 |
| lysr family transcriptional regulator | EJP69_12175 | Not Available | Negative | 2621956 - 2622876 | 33413.1 |
| tannase/feruloyl esterase family alpha/beta hydrolase | EJP69_12180 | Not Available | Positive | 2622998 - 2625763 | 94585.4 |
| hypothetical protein | EJP69_12185 | Not Available | Positive | 2625760 - 2627127 | 48979.1 |
| tripartite tricarboxylate transporter substrate binding protein bugd | EJP69_12190 | Not Available | Positive | 2627160 - 2628137 | 33976.4 |
| nucleoside deaminase | EJP69_12195 | Not Available | Negative | 2628160 - 2628636 | 17727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
