Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | EJP69_11745 | Not Available | Positive | 2529908 - 2530696 | 29354.1 |
| type ii/iv secretion system protein | EJP69_11750 | Not Available | Positive | 2530693 - 2532489 | 66086.1 |
| tripartite tricarboxylate transporter tctb family protein | EJP69_11755 | Not Available | Positive | 2532630 - 2533118 | 17178.8 |
| tripartite tricarboxylate transporter permease | EJP69_11760 | Not Available | Positive | 2533138 - 2534649 | 52779.1 |
| lysr family transcriptional regulator | EJP69_11765 | Not Available | Negative | 2534712 - 2535638 | 33364.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_11770 | Not Available | Positive | 2535736 - 2536707 | 34080.3 |
| gamma-glutamyltransferase family protein | EJP69_11775 | Not Available | Positive | 2536839 - 2538452 | 57843.0 |
| dmt family transporter | EJP69_11780 | Not Available | Positive | 2538576 - 2539466 | 31631.1 |
| sdr family oxidoreductase | EJP69_11785 | Not Available | Positive | 2539501 - 2540292 | 26997.4 |
| dmt family transporter | EJP69_11795 | Not Available | Negative | 2542083 - 2542991 | 32881.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
