Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | EJP69_11390 | Not Available | Positive | 2460614 - 2461180 | 21071.2 |
| class c beta-lactamase-related serine hydrolase | EJP69_11395 | Not Available | Positive | 2461177 - 2462229 | 37116.4 |
| lysr family transcriptional regulator | EJP69_11400 | Not Available | Negative | 2462226 - 2463134 | 33445.8 |
| transporter substrate-binding domain-containing protein | EJP69_11405 | Not Available | Positive | 2463263 - 2464159 | 31978.4 |
| aminotransferase class v-fold plp-dependent enzyme | EJP69_11410 | Not Available | Positive | 2464163 - 2465467 | 47778.3 |
| hypothetical protein | EJP69_11415 | Not Available | Positive | 2465542 - 2466666 | 40905.2 |
| toxic anion resistance protein | EJP69_11420 | Not Available | Positive | 2466684 - 2467934 | 45915.8 |
| vwa domain-containing protein | EJP69_11425 | Not Available | Positive | 2467952 - 2469514 | 55287.2 |
| hypothetical protein | EJP69_11430 | Not Available | Positive | 2469514 - 2470143 | 22719.8 |
| aldehyde dehydrogenase | EJP69_11435 | Not Available | Negative | 2470154 - 2471605 | 50110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
