Variovorax gossypii str. DSM 100435

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax gossypii str. DSM 100435 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is notable for being non-spore-forming and possesses a single replicon, which is relevant for its genomic stability and replication processes. As a member of the genus Variovorax, this species is likely to play a role in various ecological contexts, particularly in the degradation of organic compounds. The aerobic nature of V. gossypii suggests that it thrives in oxygen-rich environments, which may influence its habitat and interactions with other microorganisms. The accession number RXOE00000000.1 is associated with its genomic data, providing a resource for further research into its genetic makeup and potential applications in bioremediation or organic matter breakdown. Understanding the metabolic pathways and ecological roles of such bacteria may enhance our knowledge of nutrient cycling and soil health, indicating the importance of Variovorax gossypii in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax gossypii
StrainDSM 100435

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax gossypii strain DSM 100435 45, whole genome shotgun

Gene Summary

Adenine Count

1023038 bp

Thymine Count

1028372 bp

Guanine Count

2128089 bp

Cytosine Count

2121555 bp

Genome Length

6302100 bp

Protein-coding Genes

5721 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trypsin-like serine proteaseEJP69_11185Not AvailableNegative2409950 - 241111340392.3
mfs transporterEJP69_11190Not AvailablePositive2411411 - 241276348340.1
nif3-like dinuclear metal center hexameric proteinEJP69_11195Not AvailablePositive2412760 - 241353327200.3
4-hydroxythreonine-4-phosphate dehydrogenase pdxaEJP69_11200Not AvailablePositive2413530 - 241456435513.9
large conductance mechanosensitive channel protein msclEJP69_11205Not AvailableNegative2414680 - 241511115358.2
tetratricopeptide repeat proteinEJP69_11210Not AvailableNegative2415171 - 241766092479.7
s-layer family proteinEJP69_11215Not AvailableNegative2417836 - 242038281368.0
response regulator transcription factorEJP69_11220Not AvailablePositive2421002 - 242180829360.3
ubiquinol-cytochrome c reductase iron-sulfur subunitEJP69_11225Not AvailablePositive2421979 - 242259622072.4
cytochrome bc complex cytochrome b subunitEJP69_11230Not AvailablePositive2422611 - 242404754072.7

Displaying genes 2211 – 2220 of 5768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.