Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | EJP69_11085 | Not Available | Positive | 2394802 - 2395443 | 23009.1 |
| histidinol dehydrogenase | EJP69_11090 | Not Available | Positive | 2395462 - 2396784 | 46708.7 |
| hypothetical protein | EJP69_11095 | Not Available | Positive | 2396823 - 2397668 | 30319.8 |
| hypothetical protein | EJP69_11100 | Not Available | Positive | 2397668 - 2398024 | 13063.9 |
| histidinol-phosphate transaminase | EJP69_11105 | Not Available | Positive | 2398021 - 2399118 | 39463.2 |
| imidazoleglycerol-phosphate dehydratase hisb | EJP69_11110 | Not Available | Positive | 2399115 - 2399732 | 22119.4 |
| imidazole glycerol phosphate synthase subunit hish | EJP69_11115 | Not Available | Positive | 2399752 - 2400411 | 23873.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EJP69_11120 | Not Available | Positive | 2400476 - 2401216 | 25967.1 |
| atp-binding protein | EJP69_11125 | Not Available | Positive | 2401236 - 2402408 | 42456.1 |
| amino acid abc transporter substrate-binding protein | EJP69_11130 | Not Available | Negative | 2402431 - 2403348 | 33337.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
