Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus secretin pilq | EJP69_10985 | Not Available | Positive | 2372247 - 2374397 | 76107.9 |
| shikimate kinase | EJP69_10990 | Not Available | Positive | 2374421 - 2374969 | 20184.4 |
| 3-dehydroquinate synthase | EJP69_10995 | Not Available | Positive | 2374999 - 2376117 | 39548.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | EJP69_11000 | Not Available | Positive | 2376117 - 2377247 | 42462.2 |
| mfs transporter | EJP69_11005 | Not Available | Positive | 2377244 - 2378500 | 42490.0 |
| duf1415 domain-containing protein | EJP69_11010 | Not Available | Positive | 2378497 - 2379072 | 20867.4 |
| sam-dependent methyltransferase | EJP69_11015 | Not Available | Positive | 2379069 - 2379947 | 32467.3 |
| transposase | EJP69_11020 | Not Available | Positive | 2379989 - 2380684 | 26079.0 |
| glutamate synthase subunit alpha | EJP69_11025 | Not Available | Positive | 2380871 - 2385637 | 173330.0 |
| glutamate synthase subunit beta | EJP69_11030 | Not Available | Positive | 2385676 - 2387154 | 53767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
