Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | EJP69_10270 | Not Available | Positive | 2210518 - 2211471 | 34434.4 |
| glucose-6-phosphate isomerase | EJP69_10275 | Not Available | Positive | 2211474 - 2213027 | 56472.1 |
| duf805 domain-containing protein | EJP69_10280 | Not Available | Positive | 2213172 - 2213504 | 12272.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | EJP69_10285 | Not Available | Negative | 2213585 - 2214658 | 37406.0 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_10290 | Not Available | Negative | 2214711 - 2215691 | 33816.8 |
| lysr family transcriptional regulator | EJP69_10295 | Not Available | Positive | 2215816 - 2216715 | 32463.6 |
| sugar abc transporter substrate-binding protein | EJP69_10300 | Not Available | Positive | 2216896 - 2218206 | 47469.7 |
| sugar abc transporter permease | EJP69_10305 | Not Available | Positive | 2218345 - 2219202 | 31931.2 |
| carbohydrate abc transporter permease | EJP69_10310 | Not Available | Positive | 2219216 - 2220052 | 30537.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EJP69_10315 | Not Available | Positive | 2220223 - 2221263 | 37505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
