Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | EJP69_09445 | Not Available | Positive | 2021605 - 2022495 | 31703.8 |
| duf3426 domain-containing protein | EJP69_09450 | Not Available | Positive | 2022581 - 2024029 | 51727.2 |
| carbohydrate kinase family protein | EJP69_09455 | Not Available | Positive | 2024094 - 2024996 | 32240.8 |
| histone | EJP69_09460 | Not Available | Negative | 2025102 - 2025611 | 16472.9 |
| ribonucleotide-diphosphate reductase subunit beta | EJP69_09465 | Not Available | Negative | 2025808 - 2027055 | 47123.1 |
| ribonucleoside-diphosphate reductase subunit alpha | EJP69_09470 | Not Available | Negative | 2027249 - 2030167 | 107855.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EJP69_09475 | Not Available | Negative | 2030517 - 2031122 | 22741.6 |
| sigma-54-dependent fis family transcriptional regulator | EJP69_09480 | Not Available | Negative | 2031109 - 2032683 | 55869.5 |
| pas domain-containing sensor histidine kinase | EJP69_09485 | Not Available | Negative | 2032688 - 2034385 | 61713.6 |
| hypothetical protein | EJP69_09490 | Not Available | Negative | 2034382 - 2034645 | 9759.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
