Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family protein | EJP69_00700 | Not Available | Negative | 155074 - 155379 | 11860.1 |
| lyse family translocator | EJP69_00705 | Not Available | Positive | 155519 - 156160 | 22664.2 |
| hypothetical protein | EJP69_00710 | Not Available | Negative | 156176 - 156484 | 11292.7 |
| fad-dependent oxidoreductase | EJP69_00715 | Not Available | Negative | 156481 - 157737 | 43954.4 |
| squalene synthase hpnd | EJP69_00720 | Not Available | Negative | 157913 - 158752 | 31643.1 |
| squalene synthase hpnc | EJP69_00725 | Not Available | Negative | 158749 - 159663 | 33765.5 |
| potassium transporter kup | EJP69_00730 | Not Available | Positive | 159815 - 161659 | 66213.3 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_00735 | Not Available | Positive | 161776 - 162975 | 41493.3 |
| efflux rnd transporter permease subunit | EJP69_00740 | Not Available | Positive | 162972 - 166130 | 114335.0 |
| Trna-leu | Not Available | Not Available | Positive | 166236 - 166322 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
