Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | EJP69_05345 | Not Available | Negative | 1135264 - 1136574 | 48032.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EJP69_05350 | Not Available | Negative | 1136590 - 1137876 | 46141.5 |
| helix-turn-helix domain-containing protein | EJP69_05355 | Not Available | Negative | 1137873 - 1138838 | 32538.0 |
| type iv pilus biogenesis/stability protein pilw | EJP69_05360 | Not Available | Negative | 1138831 - 1139688 | 31470.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EJP69_05365 | Not Available | Negative | 1139693 - 1140844 | 42571.2 |
| nucleoside-diphosphate kinase | EJP69_05370 | Not Available | Negative | 1140867 - 1141292 | 15235.3 |
| rrna pseudouridine synthase | EJP69_05375 | Not Available | Negative | 1141446 - 1143257 | 65029.1 |
| smc-scp complex subunit scpb | EJP69_05380 | Not Available | Negative | 1143254 - 1144228 | 34561.1 |
| rlua family pseudouridine synthase | EJP69_05385 | Not Available | Negative | 1144358 - 1145374 | 36836.2 |
| outer membrane protein assembly factor bamd | EJP69_05390 | Not Available | Positive | 1145407 - 1146216 | 30164.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
