Limnohabitans sp. 63ED37-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 63ED37-2 is characterized by a single replicon, which suggests a streamlined genomic structure typical of many bacteria. The genomic information for this strain is available under the accession NZ_CP011774.1, providing a valuable resource for researchers interested in its genetic makeup and potential applications. This bacterium is part of the Limnohabitans genus, which is known for its ecological role in freshwater environments. Members of this genus are often found in various aquatic habitats, contributing to nutrient cycling and microbial diversity. The presence of a single replicon may indicate a particular adaptation to its environment, potentially influencing its metabolic capabilities and interactions with other microorganisms. Given its ecological niche, Limnohabitans sp. 63ED37-2 may play a significant role in the dynamics of freshwater ecosystems, particularly in processes such as decomposition and organic matter turnover. Understanding its genetic traits can provide insights into its functional roles in these environments and how it may respond to environmental changes. Overall, the study of Limnohabitans sp. 63ED37-2 contributes to our knowledge of freshwater microbiomes and the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 63ED37-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 63ED37-2 chromosome, complete genome.

Gene Summary

Adenine Count

675645 bp

Thymine Count

675961 bp

Guanine Count

1012502 bp

Cytosine Count

1008884 bp

Genome Length

3372992 bp

Protein-coding Genes

3197 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide assembly protein lapa domain-containing proteinL63ED372_RS04210Not AvailableNegative881178 - 88147110982.5
integration host factor subunit betaL63ED372_RS04215Not AvailableNegative881566 - 88188611664.9
30s ribosomal protein s1L63ED372_RS04220Not AvailableNegative882002 - 88368161512.4
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinaseL63ED372_RS04225Not AvailableNegative883897 - 88588871416.8
prephenate dehydrogenase/arogenate dehydrogenase family proteinL63ED372_RS04230Not AvailableNegative885892 - 88678831627.0
prephenate dehydrataseL63ED372_RS04235Not AvailableNegative886796 - 88789639702.4
3-phosphoserine/phosphohydroxythreonine transaminaseL63ED372_RS04240Not AvailableNegative887926 - 88901739466.4
dna gyrase subunit aL63ED372_RS04245Not AvailableNegative889021 - 89170599160.5
outer membrane protein ompaL63ED372_RS04255Not AvailablePositive891937 - 89261423132.5
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigL63ED372_RS04260Not AvailablePositive892704 - 89341426023.4

Displaying genes 851 – 860 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.