Limnohabitans sp. 63ED37-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 63ED37-2 is characterized by a single replicon, which suggests a streamlined genomic structure typical of many bacteria. The genomic information for this strain is available under the accession NZ_CP011774.1, providing a valuable resource for researchers interested in its genetic makeup and potential applications. This bacterium is part of the Limnohabitans genus, which is known for its ecological role in freshwater environments. Members of this genus are often found in various aquatic habitats, contributing to nutrient cycling and microbial diversity. The presence of a single replicon may indicate a particular adaptation to its environment, potentially influencing its metabolic capabilities and interactions with other microorganisms. Given its ecological niche, Limnohabitans sp. 63ED37-2 may play a significant role in the dynamics of freshwater ecosystems, particularly in processes such as decomposition and organic matter turnover. Understanding its genetic traits can provide insights into its functional roles in these environments and how it may respond to environmental changes. Overall, the study of Limnohabitans sp. 63ED37-2 contributes to our knowledge of freshwater microbiomes and the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 63ED37-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 63ED37-2 chromosome, complete genome.

Gene Summary

Adenine Count

675645 bp

Thymine Count

675961 bp

Guanine Count

1012502 bp

Cytosine Count

1008884 bp

Genome Length

3372992 bp

Protein-coding Genes

3197 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system ccda family antitoxinL63ED372_RS13675Not AvailablePositive2893287 - 28935509899.6
ccdb family proteinL63ED372_RS13680Not AvailablePositive2893550 - 289386711720.3
fumarylacetoacetate hydrolase family proteinL63ED372_RS13685Not AvailableNegative2893960 - 289497036587.3
iclr family transcriptional regulatorL63ED372_RS13690Not AvailablePositive2895084 - 289591128954.1
duf3108 domain-containing proteinL63ED372_RS13695Not AvailablePositive2895990 - 289734247884.9
duf3567 domain-containing proteinL63ED372_RS13700Not AvailablePositive2897443 - 289772410523.2
abrb family transcriptional regulatorL63ED372_RS13705Not AvailableNegative2897732 - 289880838166.7
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeL63ED372_RS13710Not AvailableNegative2898840 - 290015347793.4
formyltetrahydrofolate deformylaseL63ED372_RS13715Not AvailablePositive2900388 - 290124231826.0
lysr substrate-binding domain-containing proteinL63ED372_RS13720Not AvailablePositive2901290 - 290216532317.9

Displaying genes 2761 – 2770 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.