Limnohabitans sp. 63ED37-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 63ED37-2 is characterized by a single replicon, which suggests a streamlined genomic structure typical of many bacteria. The genomic information for this strain is available under the accession NZ_CP011774.1, providing a valuable resource for researchers interested in its genetic makeup and potential applications. This bacterium is part of the Limnohabitans genus, which is known for its ecological role in freshwater environments. Members of this genus are often found in various aquatic habitats, contributing to nutrient cycling and microbial diversity. The presence of a single replicon may indicate a particular adaptation to its environment, potentially influencing its metabolic capabilities and interactions with other microorganisms. Given its ecological niche, Limnohabitans sp. 63ED37-2 may play a significant role in the dynamics of freshwater ecosystems, particularly in processes such as decomposition and organic matter turnover. Understanding its genetic traits can provide insights into its functional roles in these environments and how it may respond to environmental changes. Overall, the study of Limnohabitans sp. 63ED37-2 contributes to our knowledge of freshwater microbiomes and the importance of microbial diversity in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 63ED37-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 63ED37-2 chromosome, complete genome.

Gene Summary

Adenine Count

675645 bp

Thymine Count

675961 bp

Guanine Count

1012502 bp

Cytosine Count

1008884 bp

Genome Length

3372992 bp

Protein-coding Genes

3197 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine triad nucleotide-binding proteinL63ED372_RS12820Not AvailableNegative2728286 - 272864213188.2
zinc ribbon domain-containing proteinL63ED372_RS12825Not AvailableNegative2728671 - 272902912947.8
phosphoribosyl-atp diphosphataseL63ED372_RS12830Not AvailableNegative2729039 - 272940713405.0
phosphoribosyl-amp cyclohydrolaseL63ED372_RS12835Not AvailableNegative2729421 - 272981014927.8
txe/yoeb family addiction module toxinL63ED372_RS12840Not AvailableNegative2729865 - 273011910148.2
type ii toxin-antitoxin system phd/yefm family antitoxinL63ED372_RS12845Not AvailableNegative2730116 - 27303679202.1
ta system antitoxin pard family proteinL63ED372_RS12850Not AvailablePositive2730514 - 27307328070.61
imidazole glycerol phosphate synthase subunit hisfL63ED372_RS12855Not AvailableNegative2731577 - 273237728163.5
d-hexose-6-phosphate mutarotaseL63ED372_RS12860Not AvailableNegative2732402 - 273325931117.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseL63ED372_RS12865Not AvailableNegative2733281 - 273402126100.3

Displaying genes 2591 – 2600 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.