Vibrio tapetis subsp. tapetis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tapetis subsp. tapetis is a bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. This subspecies is notable for its association with marine environments, particularly in its role as a pathogen in certain mollusks. The genetic information of Vibrio tapetis subsp. tapetis is represented in two significant accessions: NZ_LT960613.1 and NZ_LT960612.1. These accessions provide insights into the genetic makeup and potential functional capabilities of this bacterium, which may contribute to its pathogenicity and adaptability in marine ecosystems. Ecologically, Vibrio tapetis subsp. tapetis plays a role in the dynamics of marine microbial communities, particularly in relation to its interactions with mollusks. Understanding its genetic structure and replicon composition can shed light on its behavior in marine environments and its impact on host organisms. The presence of this bacterium in mollusks can have significant implications for aquaculture and marine biodiversity, as it may influence the health of these organisms and the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tapetis
Strainsubsp. tapetis

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tapetis subsp. tapetis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600

Gene Summary

Adenine Count

520921 bp

Thymine Count

522964 bp

Guanine Count

409611 bp

Cytosine Count

401657 bp

Genome Length

1855153 bp

Protein-coding Genes

1610 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome-c peroxidaseVTAP4600_RS18320Not AvailableNegative276959 - 27793035909.5
alternative ribosome-rescue factor aVTAP4600_RS18325Not AvailableNegative278078 - 2782937876.42
duf4344 domain-containing metallopeptidaseVTAP4600_RS18330Not AvailablePositive278399 - 27916328672.3
type iv secretion system protein tracVTAP4600_RS26630Not AvailablePositive279685 - 28067936281.2
hypothetical proteinVTAP4600_RS18340Not AvailableNegative280830 - 2810789475.8
methyl-accepting chemotaxis proteinVTAP4600_RS18345Not AvailableNegative281281 - 28293059794.8
methyl-accepting chemotaxis proteinVTAP4600_RS18350Not AvailableNegative283235 - 28489659888.9
sodium/glutamate symporterVTAP4600_RS18355Not AvailablePositive285466 - 28669243983.5
murein l,d-transpeptidase family proteinVTAP4600_RS18360Not AvailablePositive286791 - 28735421042.5
multidrug efflux mfs transporter emrdVTAP4600_RS18365Not AvailablePositive287639 - 28883841758.8

Displaying genes 231 – 240 of 1716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.