Vibrio tapetis subsp. tapetis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tapetis subsp. tapetis is a bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. This subspecies is notable for its association with marine environments, particularly in its role as a pathogen in certain mollusks. The genetic information of Vibrio tapetis subsp. tapetis is represented in two significant accessions: NZ_LT960613.1 and NZ_LT960612.1. These accessions provide insights into the genetic makeup and potential functional capabilities of this bacterium, which may contribute to its pathogenicity and adaptability in marine ecosystems. Ecologically, Vibrio tapetis subsp. tapetis plays a role in the dynamics of marine microbial communities, particularly in relation to its interactions with mollusks. Understanding its genetic structure and replicon composition can shed light on its behavior in marine environments and its impact on host organisms. The presence of this bacterium in mollusks can have significant implications for aquaculture and marine biodiversity, as it may influence the health of these organisms and the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tapetis
Strainsubsp. tapetis

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tapetis subsp. tapetis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tapetis subsp. tapetis


Gene Summary

Adenine Count

520921 bp

Thymine Count

522964 bp

Guanine Count

409611 bp

Cytosine Count

401657 bp

Genome Length

1855153 bp

Protein-coding Genes

1610 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinVTAP4600_RS17355Not AvailableNegative36487 - 367178512.14
replication initiation proteinVTAP4600_RS17360Not AvailableNegative37120 - 3828645074.1
hypothetical proteinVTAP4600_RS17365Not AvailableNegative38291 - 3858410756.2
Regulatory protein ciiVTAP4600_RS17370Not AvailableNegative38922 - 3947019839.9
Hypothetical proteinVTAP4600_RS17375Not AvailableNegative39581 - 397938150.14
Ci repressorVTAP4600_RS17380Not AvailablePositive39885 - 4051123415.2
hypothetical proteinVTAP4600_RS17385Not AvailablePositive40680 - 408627155.32
Hnh endonucleaseVTAP4600_RS17390Not AvailablePositive40859 - 4129916524.4
Abc transporter, atp-binding protein-related proteinVTAP4600_RS17395Not AvailablePositive41292 - 4308268330.6
TransposaseVTAP4600_RS17400Not AvailablePositive43108 - 4431946738.0

Displaying genes 11 – 20 of 1716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.