Vibrio tapetis subsp. tapetis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tapetis subsp. tapetis is a bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. This subspecies is notable for its association with marine environments, particularly in its role as a pathogen in certain mollusks. The genetic information of Vibrio tapetis subsp. tapetis is represented in two significant accessions: NZ_LT960613.1 and NZ_LT960612.1. These accessions provide insights into the genetic makeup and potential functional capabilities of this bacterium, which may contribute to its pathogenicity and adaptability in marine ecosystems. Ecologically, Vibrio tapetis subsp. tapetis plays a role in the dynamics of marine microbial communities, particularly in relation to its interactions with mollusks. Understanding its genetic structure and replicon composition can shed light on its behavior in marine environments and its impact on host organisms. The presence of this bacterium in mollusks can have significant implications for aquaculture and marine biodiversity, as it may influence the health of these organisms and the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tapetis
Strainsubsp. tapetis

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tapetis subsp. tapetis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600

Gene Summary

Adenine Count

520921 bp

Thymine Count

522964 bp

Guanine Count

409611 bp

Cytosine Count

401657 bp

Genome Length

1855153 bp

Protein-coding Genes

1610 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2913 family proteinVTAP4600_RS18005Not AvailableNegative189006 - 18957822023.7
choline/carnitine o-acyltransferaseVTAP4600_RS18010Not AvailableNegative189755 - 19158168340.2
betaine-aldehyde dehydrogenaseVTAP4600_RS18015Not AvailablePositive192083 - 19354952258.7
choline dehydrogenaseVTAP4600_RS18020Not AvailablePositive193559 - 19525362521.2
bcct family transporterVTAP4600_RS18025Not AvailablePositive195517 - 19673445803.7
voc family proteinVTAP4600_RS18030Not AvailablePositive197108 - 19747314026.8
alpha-ketoglutarate-dependent dioxygenase alkb family proteinVTAP4600_RS18035Not AvailableNegative197505 - 19809522967.2
fad-binding and (fe-s)-binding domain-containing proteinVTAP4600_RS18040Not AvailableNegative198156 - 200990103089.0
uroporphyrinogen-iii c-methyltransferaseVTAP4600_RS18045Not AvailableNegative201132 - 20189627373.8
formate/nitrite transporter family proteinVTAP4600_RS18050Not AvailableNegative202073 - 20292430079.7

Displaying genes 171 – 180 of 1716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.