Rhodobacteraceae bacterium HLUCCA08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HLUCCA08 is a member of the Rhodobacteraceae family, characterized by a single replicon within its genomic structure. The accession number for this bacterium is LJSF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Rhodobacteraceae, HLUCCA08 is likely to exhibit traits common to this group, such as photosynthetic capabilities and a role in various ecological interactions. While specific metabolic pathways and ecological functions are not detailed in the provided data, members of the Rhodobacteraceae are often involved in the cycling of nutrients in marine and freshwater environments, contributing to the overall health of these ecosystems. The presence of a single replicon may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation processes in various environmental conditions. Such adaptability could be advantageous for survival in fluctuating ecosystems, where resource availability and environmental parameters change. In summary, Rhodobacteraceae bacterium HLUCCA08 represents an organism with a single replicon and is part of a family known for its ecological significance. Understanding its genetic makeup and environmental interactions could provide insights into its role in nutrient cycling and ecosystem dynamics within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodobacteraceae bacterium HLUCCA08 ITZX_scaf_1285, whole

Gene Summary

Adenine Count

598178 bp

Thymine Count

599233 bp

Guanine Count

1251691 bp

Cytosine Count

1249317 bp

Genome Length

3698543 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carnitine 3-dehydrogenaseHLUCCA08_05495Not AvailablePositive16076 - 1753952299.9
dehydrogenaseHLUCCA08_05500Not AvailablePositive17536 - 1829425896.0
putative membrane proteinHLUCCA08_05505Not AvailablePositive18385 - 1929931702.6
putative ntp pyrophosphohydrolaseHLUCCA08_05510Not AvailableNegative19296 - 1998824776.5
hypothetical proteinHLUCCA08_05515Not AvailableNegative20010 - 2041414849.3
ef hand/ef-hand domain pairHLUCCA08_05520Not AvailablePositive20611 - 2117719576.6
rna polymerase sigma-70 factor, ecf subfamilyHLUCCA08_05525Not AvailablePositive21255 - 2184220913.0
hypothetical proteinHLUCCA08_05530Not AvailablePositive21829 - 2219112157.7
putative integral membrane proteinHLUCCA08_05535Not AvailablePositive22188 - 2267317855.6
two-component system, cell cycle response regulatorHLUCCA08_05540Not AvailableNegative22685 - 2410050585.6

Displaying genes 41 – 50 of 3729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.