Rhodobacteraceae bacterium HLUCCA08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HLUCCA08 is a member of the Rhodobacteraceae family, characterized by a single replicon within its genomic structure. The accession number for this bacterium is LJSF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Rhodobacteraceae, HLUCCA08 is likely to exhibit traits common to this group, such as photosynthetic capabilities and a role in various ecological interactions. While specific metabolic pathways and ecological functions are not detailed in the provided data, members of the Rhodobacteraceae are often involved in the cycling of nutrients in marine and freshwater environments, contributing to the overall health of these ecosystems. The presence of a single replicon may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation processes in various environmental conditions. Such adaptability could be advantageous for survival in fluctuating ecosystems, where resource availability and environmental parameters change. In summary, Rhodobacteraceae bacterium HLUCCA08 represents an organism with a single replicon and is part of a family known for its ecological significance. Understanding its genetic makeup and environmental interactions could provide insights into its role in nutrient cycling and ecosystem dynamics within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodobacteraceae bacterium HLUCCA08 ITZX_scaf_1285, whole

Gene Summary

Adenine Count

598178 bp

Thymine Count

599233 bp

Guanine Count

1251691 bp

Cytosine Count

1249317 bp

Genome Length

3698543 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase, m23/m37 familyHLUCCA08_12395Not AvailablePositive3058771 - 306008448349.1
integral membrane protein ccma involved in cell shape determinationHLUCCA08_12400Not AvailablePositive3060074 - 306062218183.3
major facilitator superfamilyHLUCCA08_12405Not AvailablePositive3060626 - 306211950888.3
putative integral membrane proteinHLUCCA08_12410Not AvailableNegative3062107 - 306288328197.3
peptide chain relase factor 2 prfbHLUCCA08_12415Not AvailableNegative3063049 - 306417341254.1
penicillin-binding protein 1a mcraHLUCCA08_12420Not AvailableNegative3064275 - 306679492105.5
methyltransferase domainHLUCCA08_12425Not AvailablePositive3066952 - 306758122483.7
n-acetylmuramoyl-l-alanine amidaseHLUCCA08_12430Not AvailableNegative3067588 - 306881443664.1
aspartate/tyrosine/aromatic aminotransferaseHLUCCA08_12435Not AvailableNegative3068811 - 306995640936.2
putative zinc metalloproteaseHLUCCA08_12440Not AvailablePositive3070014 - 307133947032.1

Displaying genes 3091 – 3100 of 3729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.