Rhodobacteraceae bacterium HLUCCA08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HLUCCA08 is a member of the Rhodobacteraceae family, characterized by a single replicon within its genomic structure. The accession number for this bacterium is LJSF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Rhodobacteraceae, HLUCCA08 is likely to exhibit traits common to this group, such as photosynthetic capabilities and a role in various ecological interactions. While specific metabolic pathways and ecological functions are not detailed in the provided data, members of the Rhodobacteraceae are often involved in the cycling of nutrients in marine and freshwater environments, contributing to the overall health of these ecosystems. The presence of a single replicon may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation processes in various environmental conditions. Such adaptability could be advantageous for survival in fluctuating ecosystems, where resource availability and environmental parameters change. In summary, Rhodobacteraceae bacterium HLUCCA08 represents an organism with a single replicon and is part of a family known for its ecological significance. Understanding its genetic makeup and environmental interactions could provide insights into its role in nutrient cycling and ecosystem dynamics within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodobacteraceae bacterium HLUCCA08 ITZX_scaf_1285, whole

Gene Summary

Adenine Count

598178 bp

Thymine Count

599233 bp

Guanine Count

1251691 bp

Cytosine Count

1249317 bp

Genome Length

3698543 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative spermidine/putrescine transport system permease proteinHLUCCA08_06545Not AvailablePositive217239 - 21844743449.4
putative permeaseHLUCCA08_06550Not AvailableNegative218504 - 21943332184.3
phosphoribosyl 1,2-cyclic phosphate phosphodiesteraseHLUCCA08_06555Not AvailableNegative219438 - 22023828979.4
tatd dnase family proteinHLUCCA08_06560Not AvailableNegative220235 - 22103528703.0
dna polymerase iii delta' subunit holbHLUCCA08_06565Not AvailableNegative221051 - 22218740416.7
hypothetical proteinHLUCCA08_06570Not AvailablePositive222429 - 2226838982.0
dtmp kinase tmkHLUCCA08_06575Not AvailableNegative222697 - 22332022717.2
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)HLUCCA08_06580Not AvailableNegative223328 - 22452442629.8
hypothetical proteinHLUCCA08_06585Not AvailableNegative224556 - 22562937030.0
Trna-serNot AvailableNot AvailablePositive225854 - 225943Not Available

Displaying genes 251 – 260 of 3729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.