Rhodobacteraceae bacterium HLUCCA08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HLUCCA08 is a member of the Rhodobacteraceae family, characterized by a single replicon within its genomic structure. The accession number for this bacterium is LJSF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Rhodobacteraceae, HLUCCA08 is likely to exhibit traits common to this group, such as photosynthetic capabilities and a role in various ecological interactions. While specific metabolic pathways and ecological functions are not detailed in the provided data, members of the Rhodobacteraceae are often involved in the cycling of nutrients in marine and freshwater environments, contributing to the overall health of these ecosystems. The presence of a single replicon may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation processes in various environmental conditions. Such adaptability could be advantageous for survival in fluctuating ecosystems, where resource availability and environmental parameters change. In summary, Rhodobacteraceae bacterium HLUCCA08 represents an organism with a single replicon and is part of a family known for its ecological significance. Understanding its genetic makeup and environmental interactions could provide insights into its role in nutrient cycling and ecosystem dynamics within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodobacteraceae bacterium HLUCCA08 ITZX_scaf_1285, whole

Gene Summary

Adenine Count

598178 bp

Thymine Count

599233 bp

Guanine Count

1251691 bp

Cytosine Count

1249317 bp

Genome Length

3698543 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown function (duf2852)HLUCCA08_04925Not AvailableNegative2429517 - 243015824230.7
hypothetical proteinHLUCCA08_04930Not AvailableNegative2430202 - 243067216056.2
protein of unknown function containing duf4440 domainHLUCCA08_04935Not AvailablePositive2430734 - 243110813937.4
glutamate-ammonia-ligase adenylyltransferase glneHLUCCA08_04940Not AvailablePositive2431105 - 243387699139.4
hypothetical proteinHLUCCA08_04945Not AvailablePositive2433873 - 24341429588.5
bifunctional 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase edaHLUCCA08_04950Not AvailableNegative2434168 - 243480921226.7
phosphogluconate dehydratase eddHLUCCA08_04955Not AvailableNegative2434844 - 243664662374.8
prokaryotic membrane lipoprotein lipid attachment siteHLUCCA08_04960Not AvailablePositive2436900 - 243751421857.2
23s rrna (cytosine1962-c5)-methyltransferase rlmiHLUCCA08_04965Not AvailablePositive2437557 - 243875041997.8
pin domainHLUCCA08_04970Not AvailablePositive2438800 - 243937220404.8

Displaying genes 2451 – 2460 of 3729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.