Rhodobacteraceae bacterium HLUCCA08

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium HLUCCA08 is a member of the Rhodobacteraceae family, characterized by a single replicon within its genomic structure. The accession number for this bacterium is LJSF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Rhodobacteraceae, HLUCCA08 is likely to exhibit traits common to this group, such as photosynthetic capabilities and a role in various ecological interactions. While specific metabolic pathways and ecological functions are not detailed in the provided data, members of the Rhodobacteraceae are often involved in the cycling of nutrients in marine and freshwater environments, contributing to the overall health of these ecosystems. The presence of a single replicon may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation processes in various environmental conditions. Such adaptability could be advantageous for survival in fluctuating ecosystems, where resource availability and environmental parameters change. In summary, Rhodobacteraceae bacterium HLUCCA08 represents an organism with a single replicon and is part of a family known for its ecological significance. Understanding its genetic makeup and environmental interactions could provide insights into its role in nutrient cycling and ecosystem dynamics within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodobacteraceae bacterium HLUCCA08 ITZX_scaf_1285, whole

Gene Summary

Adenine Count

598178 bp

Thymine Count

599233 bp

Guanine Count

1251691 bp

Cytosine Count

1249317 bp

Genome Length

3698543 bp

Protein-coding Genes

3669 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-sorbitol dehydrogenase smosHLUCCA08_15915Not AvailableNegative2173103 - 217387627052.4
abc-type sorbitol/mannitol uptake system atpase component smokHLUCCA08_15920Not AvailableNegative2173873 - 217487736300.8
abc-type sorbitol/mannitol uptake system permease component smogHLUCCA08_15925Not AvailableNegative2174889 - 217571930478.3
abc-type sorbitol/mannitol uptake system permease component smofHLUCCA08_15930Not AvailableNegative2175736 - 217665934022.7
abc-type sorbitol/mannitol uptake system substrate-binding component smoeHLUCCA08_15935Not AvailableNegative2176764 - 217807747198.4
laci family transcriptional regulatorHLUCCA08_15940Not AvailableNegative2178213 - 217924138046.2
ribokinase family sugar kinaseHLUCCA08_15945Not AvailablePositive2179425 - 218037232937.2
d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunitHLUCCA08_15950Not AvailablePositive2180372 - 218162244368.8
phosphomannomutase manbHLUCCA08_15955Not AvailablePositive2181693 - 218305746760.8
class ii fructose-bisphosphate aldolase fbaaHLUCCA08_15960Not AvailableNegative2183054 - 218387828223.7

Displaying genes 2201 – 2210 of 3729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.