Phormidium sp. OSCR

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium sp. OSCR is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The organism is cataloged under the accession number LJZT00000000.1, which provides a reference for further genetic and taxonomic studies. As a member of the cyanobacterial group, Phormidium species are typically recognized for their filamentous morphology and ability to thrive in various aquatic environments. These cyanobacteria play a crucial role in their ecosystems, contributing to primary production and nitrogen fixation. While specific ecological roles of Phormidium sp. OSCR are not detailed, related species are known to contribute to the formation of biofilms and serve as a food source for various microorganisms and larger organisms within their habitats. The presence of a single replicon in Phormidium sp. OSCR may suggest an evolutionary advantage in specific environments, potentially reflecting adaptations to fluctuating conditions in aquatic ecosystems. Understanding the genomic features and ecological roles of such organisms is essential for comprehending their contributions to biodiversity and ecosystem functioning. In summary, Phormidium sp. OSCR, with its unique genetic structure and ecological potential, exemplifies the importance of cyanobacteria in aquatic ecosystems, warranting further exploration of its ecological impacts and functional roles.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium sp. OSCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium sp. OSCR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phormidium sp. OSCR ITZY_scaf_2165, whole genome shotgun

Gene Summary

Adenine Count

1153725 bp

Thymine Count

1142765 bp

Guanine Count

1189205 bp

Cytosine Count

1209007 bp

Genome Length

4694862 bp

Protein-coding Genes

4158 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown function (duf1249)HLUCCO16_20070Not AvailablePositive4259222 - 425956612680.8
beta-lactamase enzyme familyHLUCCO16_20075Not AvailableNegative4259602 - 426097251239.9
serine/threonine protein kinaseHLUCCO16_20080Not AvailableNegative4260985 - 426186931450.5
dna or rna helicases of superfamily iiHLUCCO16_20085Not AvailablePositive4261997 - 426239214810.2
abc-type branched-chain amino acid uptake system substrate-binding component livkHLUCCO16_20090Not AvailablePositive4262784 - 426442759381.9
hypothetical proteinHLUCCO16_20095Not AvailablePositive4264479 - 426493717368.6
zinc-ribbon domain/tubulin likeHLUCCO16_20100Not AvailablePositive4265006 - 4268320125740.0
abc-type l-amino acid uptake system substrate-binding component aapjHLUCCO16_20105Not AvailablePositive4268773 - 426984338517.9
abc-type l-amino acid uptake system permease component aapqHLUCCO16_20110Not AvailablePositive4270180 - 427114235880.1
abc-type l-amino acid uptake system permease component aapmHLUCCO16_20115Not AvailablePositive4271178 - 427222439394.0

Displaying genes 3801 – 3810 of 4211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.