Phormidium sp. OSCR

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium sp. OSCR is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The organism is cataloged under the accession number LJZT00000000.1, which provides a reference for further genetic and taxonomic studies. As a member of the cyanobacterial group, Phormidium species are typically recognized for their filamentous morphology and ability to thrive in various aquatic environments. These cyanobacteria play a crucial role in their ecosystems, contributing to primary production and nitrogen fixation. While specific ecological roles of Phormidium sp. OSCR are not detailed, related species are known to contribute to the formation of biofilms and serve as a food source for various microorganisms and larger organisms within their habitats. The presence of a single replicon in Phormidium sp. OSCR may suggest an evolutionary advantage in specific environments, potentially reflecting adaptations to fluctuating conditions in aquatic ecosystems. Understanding the genomic features and ecological roles of such organisms is essential for comprehending their contributions to biodiversity and ecosystem functioning. In summary, Phormidium sp. OSCR, with its unique genetic structure and ecological potential, exemplifies the importance of cyanobacteria in aquatic ecosystems, warranting further exploration of its ecological impacts and functional roles.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium sp. OSCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium sp. OSCR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phormidium sp. OSCR ITZY_scaf_2165, whole genome shotgun

Gene Summary

Adenine Count

1153725 bp

Thymine Count

1142765 bp

Guanine Count

1189205 bp

Cytosine Count

1209007 bp

Genome Length

4694862 bp

Protein-coding Genes

4158 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) capaHLUCCO16_15420Not AvailableNegative3264850 - 326606445664.4
beta-lactamase class aHLUCCO16_15425Not AvailablePositive3266369 - 326772449593.6
putative rhamnosyl transferaseHLUCCO16_15430Not AvailableNegative3267728 - 326854631863.6
hypothetical proteinHLUCCO16_15435Not AvailablePositive3268615 - 32688548928.72
hemolysin-type calcium-binding repeat (2 copies)HLUCCO16_15440Not AvailableNegative3268933 - 3272106111561.0
valine--pyruvate aminotransferase avtaHLUCCO16_15445Not AvailableNegative3272411 - 327366745946.8
s23 ribosomal proteinHLUCCO16_15450Not AvailableNegative3273728 - 327409014000.2
hypothetical proteinHLUCCO16_15455Not AvailablePositive3274223 - 32743785304.86
putative zn-dependent peptidaseHLUCCO16_15460Not AvailablePositive3274517 - 327580948575.3
putative zn-dependent peptidaseHLUCCO16_15465Not AvailablePositive3275818 - 327714949032.0

Displaying genes 2901 – 2910 of 4211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.