Phormidium sp. OSCR

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium sp. OSCR is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The organism is cataloged under the accession number LJZT00000000.1, which provides a reference for further genetic and taxonomic studies. As a member of the cyanobacterial group, Phormidium species are typically recognized for their filamentous morphology and ability to thrive in various aquatic environments. These cyanobacteria play a crucial role in their ecosystems, contributing to primary production and nitrogen fixation. While specific ecological roles of Phormidium sp. OSCR are not detailed, related species are known to contribute to the formation of biofilms and serve as a food source for various microorganisms and larger organisms within their habitats. The presence of a single replicon in Phormidium sp. OSCR may suggest an evolutionary advantage in specific environments, potentially reflecting adaptations to fluctuating conditions in aquatic ecosystems. Understanding the genomic features and ecological roles of such organisms is essential for comprehending their contributions to biodiversity and ecosystem functioning. In summary, Phormidium sp. OSCR, with its unique genetic structure and ecological potential, exemplifies the importance of cyanobacteria in aquatic ecosystems, warranting further exploration of its ecological impacts and functional roles.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium sp. OSCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium sp. OSCR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phormidium sp. OSCR ITZY_scaf_2165, whole genome shotgun

Gene Summary

Adenine Count

1153725 bp

Thymine Count

1142765 bp

Guanine Count

1189205 bp

Cytosine Count

1209007 bp

Genome Length

4694862 bp

Protein-coding Genes

4158 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHLUCCO16_12060Not AvailablePositive2597394 - 259862046591.2
ribbon-helix-helix protein, copg familyHLUCCO16_12065Not AvailableNegative2598661 - 259893610657.5
protein of unknown function (duf3353)HLUCCO16_12070Not AvailablePositive2599177 - 259977621771.4
phosphoglycolate phosphataseHLUCCO16_12075Not AvailableNegative2599915 - 260065227788.0
his kinase a (phospho-acceptor) domain/gaf domain/histidine kinase-, dna gyrase b-, and hsp90-like aHLUCCO16_12080Not AvailablePositive2600723 - 260280177467.9
pas/pac sensor hybrid histidine kinaseHLUCCO16_12085Not AvailablePositive2603000 - 2606638136446.0
response regulators consisting of a chey-like receiver domain and a winged-helix dna-binding domainHLUCCO16_12090Not AvailablePositive2606776 - 260734221386.3
abc-type uncharacterized transport system involved in gliding motility, auxiliary componentHLUCCO16_12095Not AvailableNegative2607418 - 260917565063.2
abc-2 type transport system permease proteinHLUCCO16_12100Not AvailableNegative2609302 - 261011729481.7
abc-2 type transport system atp-binding proteinHLUCCO16_12105Not AvailableNegative2610178 - 261127239881.4

Displaying genes 2311 – 2320 of 4211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.